diff --git a/Demos/Device/ClassDriver/MassStorageKeyboard/Descriptors.c b/Demos/Device/ClassDriver/MassStorageKeyboard/Descriptors.c
index d3e4214fa227c696fc708ba6827976e4f968b939..e8523f4603675a8973ec14e7bd7f11ad12f3c54f 100644
--- a/Demos/Device/ClassDriver/MassStorageKeyboard/Descriptors.c
+++ b/Demos/Device/ClassDriver/MassStorageKeyboard/Descriptors.c
@@ -181,8 +181,8 @@ USB_Descriptor_Configuration_t PROGMEM ConfigurationDescriptor =
 		{
 			.Header                 = {.Size = sizeof(USB_Descriptor_Interface_t), .Type = DTYPE_Interface},
 
-			.InterfaceNumber        = 0x01,
-			.AlternateSetting       = 0x00,
+			.InterfaceNumber        = 1,
+			.AlternateSetting       = 0,
 			
 			.TotalEndpoints         = 1,
 				
diff --git a/LUFA.pnproj b/LUFA.pnproj
index 7a754fd54e45bfa42b933154e2c4abc19b161d27..cfa53cd518abb09d66b65d918e288582c007f5ed 100644
--- a/LUFA.pnproj
+++ b/LUFA.pnproj
@@ -1 +1 @@
-<Project name="LUFA"><Folder name="Demos"><Folder name="Device"><Folder name="ClassDriver"><Folder name="AudioInput"><File path="Demos\Device\ClassDriver\AudioInput\AudioInput.c"></File><File path="Demos\Device\ClassDriver\AudioInput\AudioInput.h"></File><File path="Demos\Device\ClassDriver\AudioInput\AudioInput.txt"></File><File path="Demos\Device\ClassDriver\AudioInput\Descriptors.c"></File><File path="Demos\Device\ClassDriver\AudioInput\Descriptors.h"></File><File path="Demos\Device\ClassDriver\AudioInput\Doxygen.conf"></File><File path="Demos\Device\ClassDriver\AudioInput\makefile"></File></Folder><Folder name="AudioOutput"><File path="Demos\Device\ClassDriver\AudioOutput\AudioOutput.c"></File><File path="Demos\Device\ClassDriver\AudioOutput\AudioOutput.h"></File><File path="Demos\Device\ClassDriver\AudioOutput\AudioOutput.txt"></File><File path="Demos\Device\ClassDriver\AudioOutput\Descriptors.c"></File><File path="Demos\Device\ClassDriver\AudioOutput\Descriptors.h"></File><File path="Demos\Device\ClassDriver\AudioOutput\Doxygen.conf"></File><File path="Demos\Device\ClassDriver\AudioOutput\makefile"></File></Folder><Folder name="DualVirtualSerial"><File path="Demos\Device\ClassDriver\DualVirtualSerial\Descriptors.c"></File><File path="Demos\Device\ClassDriver\DualVirtualSerial\Descriptors.h"></File><File path="Demos\Device\ClassDriver\DualVirtualSerial\Doxygen.conf"></File><File path="Demos\Device\ClassDriver\DualVirtualSerial\DualVirtualSerial.c"></File><File path="Demos\Device\ClassDriver\DualVirtualSerial\DualVirtualSerial.h"></File><File path="Demos\Device\ClassDriver\DualVirtualSerial\DualVirtualSerial.txt"></File><File path="Demos\Device\ClassDriver\DualVirtualSerial\LUFA DualVirtualSerial.inf"></File><File path="Demos\Device\ClassDriver\DualVirtualSerial\makefile"></File></Folder><Folder name="GenericHID"><File path="Demos\Device\ClassDriver\GenericHID\Descriptors.c"></File><File path="Demos\Device\ClassDriver\GenericHID\Descriptors.h"></File><File path="Demos\Device\ClassDriver\GenericHID\Doxygen.conf"></File><File path="Demos\Device\ClassDriver\GenericHID\GenericHID.c"></File><File path="Demos\Device\ClassDriver\GenericHID\GenericHID.h"></File><File path="Demos\Device\ClassDriver\GenericHID\GenericHID.txt"></File><File path="Demos\Device\ClassDriver\GenericHID\makefile"></File></Folder><Folder name="Joystick"><File path="Demos\Device\ClassDriver\Joystick\Descriptors.c"></File><File path="Demos\Device\ClassDriver\Joystick\Descriptors.h"></File><File path="Demos\Device\ClassDriver\Joystick\Doxygen.conf"></File><File path="Demos\Device\ClassDriver\Joystick\Joystick.c"></File><File path="Demos\Device\ClassDriver\Joystick\Joystick.h"></File><File path="Demos\Device\ClassDriver\Joystick\Joystick.txt"></File><File path="Demos\Device\ClassDriver\Joystick\makefile"></File></Folder><Folder name="Keyboard"><File path="Demos\Device\ClassDriver\Keyboard\Descriptors.c"></File><File 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path="Demos\Device\ClassDriver\MassStorage\Lib\DataflashManager.c"></File><File path="Demos\Device\ClassDriver\MassStorage\Lib\DataflashManager.h"></File><File path="Demos\Device\ClassDriver\MassStorage\Lib\SCSI.c"></File><File path="Demos\Device\ClassDriver\MassStorage\Lib\SCSI.h"></File></Folder><File path="Demos\Device\ClassDriver\MassStorage\Descriptors.c"></File><File path="Demos\Device\ClassDriver\MassStorage\Descriptors.h"></File><File path="Demos\Device\ClassDriver\MassStorage\Doxygen.conf"></File><File path="Demos\Device\ClassDriver\MassStorage\makefile"></File><File path="Demos\Device\ClassDriver\MassStorage\MassStorage.c"></File><File path="Demos\Device\ClassDriver\MassStorage\MassStorage.h"></File><File path="Demos\Device\ClassDriver\MassStorage\MassStorage.txt"></File></Folder><Folder name="MassStorageKeyboard"><Folder name="Lib"><File path="Demos\Device\ClassDriver\MassStorageKeyboard\Lib\DataflashManager.c"></File><File 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path="Projects\Incomplete\Webserver\Lib\uip\clock.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\lc.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\lc-addrlabels.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\lc-switch.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\psock.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\psock.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\pt.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\timer.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\timer.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip_arch.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip_arp.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip_arp.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip-fw.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip-fw.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uiplib.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uiplib.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip-neighbor.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip-neighbor.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uipopt.h"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip-split.c"></File><File path="Projects\Incomplete\Webserver\Lib\uip\uip-split.h"></File></Folder></Folder><File path="Projects\Incomplete\Webserver\makefile"></File><File path="Projects\Incomplete\Webserver\Webserver.c"></File><File path="Projects\Incomplete\Webserver\Webserver.h"></File></Folder></Folder><File path="Projects\makefile"></File></Folder><File path="makefile"></File><File path="README.txt"></File></Project>
\ No newline at end of file
diff --git a/LUFA/Drivers/Peripheral/AVRU4U6U7/TWI.c b/LUFA/Drivers/Peripheral/AVRU4U6U7/TWI.c
index 6028bbae93709f78631c4c4c4ee6994a4f4690dd..dda88f8babd7598e37ebc862547f4859c4cd6727 100644
--- a/LUFA/Drivers/Peripheral/AVRU4U6U7/TWI.c
+++ b/LUFA/Drivers/Peripheral/AVRU4U6U7/TWI.c
@@ -5,7 +5,7 @@
       www.fourwalledcubicle.com
 */
 
-#include "TWI.h"
+#include "../TWI.h"
 
 bool TWI_StartTransmission(uint8_t SlaveAddress)
 {
diff --git a/Projects/AVRISP-MKII/AVRISP.c b/Projects/AVRISP-MKII/AVRISP.c
index 5cb25a9850fc80f53d9da6287d5a75e948edf10a..b78923f5beccc4a66154b8f2c3841d33fd716eb6 100644
--- a/Projects/AVRISP-MKII/AVRISP.c
+++ b/Projects/AVRISP-MKII/AVRISP.c
@@ -42,8 +42,6 @@
 int main(void)
 {
 	SetupHardware();
-
-	V2Params_LoadNonVolatileParamValues();
 	
 	LEDs_SetAllLEDs(LEDMASK_USB_NOTREADY);
 
@@ -70,18 +68,7 @@ void SetupHardware(void)
 	/* Hardware Initialization */
 	LEDs_Init();
 	USB_Init();
-
-	#if defined(ADC)
-	/* Initialize the ADC converter for VTARGET level detection on supported AVR models */
-	ADC_Init(ADC_FREE_RUNNING | ADC_PRESCALE_128);
-	ADC_SetupChannel(VTARGET_ADC_CHANNEL);
-	ADC_StartReading(VTARGET_ADC_CHANNEL | ADC_RIGHT_ADJUSTED | ADC_REFERENCE_AVCC);
-	#endif
-	
-	/* Millisecond timer initialization for managing the command timeout counter */
-	OCR0A  = ((F_CPU / 64) / 1000);
-	TCCR0A = (1 << WGM01);
-	TCCR0B = ((1 << CS01) | (1 << CS00));
+	V2Protocol_Init();
 }
 
 /** Event handler for the library USB Connection event. */
diff --git a/Projects/AVRISP-MKII/Lib/ISP/ISPProtocol.c b/Projects/AVRISP-MKII/Lib/ISP/ISPProtocol.c
index 936c9abc9e3987f76dc12d8867fb703a91e5d596..59a77e57581fd93e81042b01a783100d31cb3953 100644
--- a/Projects/AVRISP-MKII/Lib/ISP/ISPProtocol.c
+++ b/Projects/AVRISP-MKII/Lib/ISP/ISPProtocol.c
@@ -54,7 +54,7 @@ void ISPProtocol_EnterISPMode(void)
 		uint8_t EnterProgBytes[4];
 	} Enter_ISP_Params;
 	
-	Endpoint_Read_Stream_LE(&Enter_ISP_Params, sizeof(Enter_ISP_Params));
+	Endpoint_Read_Stream_LE(&Enter_ISP_Params, sizeof(Enter_ISP_Params), NO_STREAM_CALLBACK);
 
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -107,7 +107,7 @@ void ISPProtocol_LeaveISPMode(void)
 		uint8_t PostDelayMS;
 	} Leave_ISP_Params;
 
-	Endpoint_Read_Stream_LE(&Leave_ISP_Params, sizeof(Leave_ISP_Params));
+	Endpoint_Read_Stream_LE(&Leave_ISP_Params, sizeof(Leave_ISP_Params), NO_STREAM_CALLBACK);
 	
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -142,7 +142,7 @@ void ISPProtocol_ProgramMemory(uint8_t V2Command)
 	} Write_Memory_Params;      // whole page and ACK the packet as fast as possible to prevent it from aborting
 	
 	Endpoint_Read_Stream_LE(&Write_Memory_Params, (sizeof(Write_Memory_Params) -
-	                                               sizeof(Write_Memory_Params.ProgData)));
+	                                               sizeof(Write_Memory_Params.ProgData)), NO_STREAM_CALLBACK);
 
 
 	Write_Memory_Params.BytesToWrite = SwapEndian_16(Write_Memory_Params.BytesToWrite);
@@ -158,7 +158,7 @@ void ISPProtocol_ProgramMemory(uint8_t V2Command)
 		return;
 	}
 	
-	Endpoint_Read_Stream_LE(&Write_Memory_Params.ProgData, Write_Memory_Params.BytesToWrite);
+	Endpoint_Read_Stream_LE(&Write_Memory_Params.ProgData, Write_Memory_Params.BytesToWrite, NO_STREAM_CALLBACK);
 
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -287,7 +287,7 @@ void ISPProtocol_ReadMemory(uint8_t V2Command)
 		uint8_t  ReadMemoryCommand;
 	} Read_Memory_Params;
 	
-	Endpoint_Read_Stream_LE(&Read_Memory_Params, sizeof(Read_Memory_Params));
+	Endpoint_Read_Stream_LE(&Read_Memory_Params, sizeof(Read_Memory_Params), NO_STREAM_CALLBACK);
 	Read_Memory_Params.BytesToRead = SwapEndian_16(Read_Memory_Params.BytesToRead);
 	
 	Endpoint_ClearOUT();
@@ -358,7 +358,7 @@ void ISPProtocol_ChipErase(void)
 		uint8_t EraseCommandBytes[4];
 	} Erase_Chip_Params;
 	
-	Endpoint_Read_Stream_LE(&Erase_Chip_Params, sizeof(Erase_Chip_Params));
+	Endpoint_Read_Stream_LE(&Erase_Chip_Params, sizeof(Erase_Chip_Params), NO_STREAM_CALLBACK);
 	
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -393,7 +393,7 @@ void ISPProtocol_ReadFuseLockSigOSCCAL(uint8_t V2Command)
 		uint8_t ReadCommandBytes[4];
 	} Read_FuseLockSigOSCCAL_Params;
 	
-	Endpoint_Read_Stream_LE(&Read_FuseLockSigOSCCAL_Params, sizeof(Read_FuseLockSigOSCCAL_Params));
+	Endpoint_Read_Stream_LE(&Read_FuseLockSigOSCCAL_Params, sizeof(Read_FuseLockSigOSCCAL_Params), NO_STREAM_CALLBACK);
 
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -423,7 +423,7 @@ void ISPProtocol_WriteFuseLock(uint8_t V2Command)
 		uint8_t WriteCommandBytes[4];
 	} Write_FuseLockSig_Params;
 	
-	Endpoint_Read_Stream_LE(&Write_FuseLockSig_Params, sizeof(Write_FuseLockSig_Params));
+	Endpoint_Read_Stream_LE(&Write_FuseLockSig_Params, sizeof(Write_FuseLockSig_Params), NO_STREAM_CALLBACK);
 
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -449,8 +449,8 @@ void ISPProtocol_SPIMulti(void)
 		uint8_t TxData[255];
 	} SPI_Multi_Params;
 	
-	Endpoint_Read_Stream_LE(&SPI_Multi_Params, sizeof(SPI_Multi_Params) - sizeof(SPI_Multi_Params.TxData));
-	Endpoint_Read_Stream_LE(&SPI_Multi_Params.TxData, SPI_Multi_Params.TxBytes);
+	Endpoint_Read_Stream_LE(&SPI_Multi_Params, (sizeof(SPI_Multi_Params) - sizeof(SPI_Multi_Params.TxData)), NO_STREAM_CALLBACK);
+	Endpoint_Read_Stream_LE(&SPI_Multi_Params.TxData, SPI_Multi_Params.TxBytes, NO_STREAM_CALLBACK);
 	
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
diff --git a/Projects/AVRISP-MKII/Lib/V2Protocol.c b/Projects/AVRISP-MKII/Lib/V2Protocol.c
index 976f24b9e33afc187065df255d9db7b8c95e630e..d6de77404ca8e4a79c1fb2f64844019a67662990 100644
--- a/Projects/AVRISP-MKII/Lib/V2Protocol.c
+++ b/Projects/AVRISP-MKII/Lib/V2Protocol.c
@@ -50,6 +50,24 @@ ISR(TIMER0_COMPA_vect, ISR_BLOCK)
 	  TimeoutMSRemaining--;
 }
 
+/** Initializes the hardware and software associated with the V2 protocol command handling. */
+void V2Protocol_Init(void)
+{
+	#if defined(ADC)
+	/* Initialize the ADC converter for VTARGET level detection on supported AVR models */
+	ADC_Init(ADC_FREE_RUNNING | ADC_PRESCALE_128);
+	ADC_SetupChannel(VTARGET_ADC_CHANNEL);
+	ADC_StartReading(VTARGET_ADC_CHANNEL | ADC_RIGHT_ADJUSTED | ADC_REFERENCE_AVCC);
+	#endif
+	
+	/* Millisecond timer initialization for managing the command timeout counter */
+	OCR0A  = ((F_CPU / 64) / 1000);
+	TCCR0A = (1 << WGM01);
+	TCCR0B = ((1 << CS01) | (1 << CS00));
+	
+	V2Params_LoadNonVolatileParamValues();
+}
+
 /** Master V2 Protocol packet handler, for received V2 Protocol packets from a connected host.
  *  This routine decodes the issued command and passes off the handling of the command to the
  *  appropriate function.
@@ -160,7 +178,7 @@ static void V2Protocol_SignOn(void)
 	Endpoint_Write_Byte(CMD_SIGN_ON);
 	Endpoint_Write_Byte(STATUS_CMD_OK);
 	Endpoint_Write_Byte(sizeof(PROGRAMMER_ID) - 1);
-	Endpoint_Write_Stream_LE(PROGRAMMER_ID, (sizeof(PROGRAMMER_ID) - 1));
+	Endpoint_Write_Stream_LE(PROGRAMMER_ID, (sizeof(PROGRAMMER_ID) - 1), NO_STREAM_CALLBACK);
 	Endpoint_ClearIN();
 }
 
@@ -222,7 +240,7 @@ static void V2Protocol_GetSetParam(const uint8_t V2Command)
  */
 static void V2Protocol_LoadAddress(void)
 {
-	Endpoint_Read_Stream_BE(&CurrentAddress, sizeof(CurrentAddress));
+	Endpoint_Read_Stream_BE(&CurrentAddress, sizeof(CurrentAddress), NO_STREAM_CALLBACK);
 
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
diff --git a/Projects/AVRISP-MKII/Lib/V2Protocol.h b/Projects/AVRISP-MKII/Lib/V2Protocol.h
index 67e44e04537429fe60f3da425a12b1d49492a325..862ea48ef787fa6ab7203c42873b507cffd9cfc2 100644
--- a/Projects/AVRISP-MKII/Lib/V2Protocol.h
+++ b/Projects/AVRISP-MKII/Lib/V2Protocol.h
@@ -70,6 +70,7 @@
 		extern bool     MustSetAddress;
 
 	/* Function Prototypes: */
+		void V2Protocol_Init(void);
 		void V2Protocol_ProcessCommand(void);
 		
 		#if defined(INCLUDE_FROM_V2PROTOCOL_C)
diff --git a/Projects/AVRISP-MKII/Lib/XPROG/XPROGProtocol.c b/Projects/AVRISP-MKII/Lib/XPROG/XPROGProtocol.c
index 1be159c380be31ed030c089525306d935509e90b..6a2d49e0084cc1f304d0a64e0d9b458064078f23 100644
--- a/Projects/AVRISP-MKII/Lib/XPROG/XPROGProtocol.c
+++ b/Projects/AVRISP-MKII/Lib/XPROG/XPROGProtocol.c
@@ -62,7 +62,7 @@ void XPROGProtocol_SetMode(void)
 		uint8_t Protocol;
 	} SetMode_XPROG_Params;
 	
-	Endpoint_Read_Stream_LE(&SetMode_XPROG_Params, sizeof(SetMode_XPROG_Params));
+	Endpoint_Read_Stream_LE(&SetMode_XPROG_Params, sizeof(SetMode_XPROG_Params), NO_STREAM_CALLBACK);
 
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -202,7 +202,7 @@ static void XPROGProtocol_Erase(void)
 		uint32_t Address;
 	} Erase_XPROG_Params;
 
-	Endpoint_Read_Stream_LE(&Erase_XPROG_Params, sizeof(Erase_XPROG_Params));
+	Endpoint_Read_Stream_LE(&Erase_XPROG_Params, sizeof(Erase_XPROG_Params), NO_STREAM_CALLBACK);
 	Erase_XPROG_Params.Address = SwapEndian_32(Erase_XPROG_Params.Address);
 
 	Endpoint_ClearOUT();
@@ -262,10 +262,10 @@ static void XPROGProtocol_WriteMemory(void)
 	} WriteMemory_XPROG_Params;
 	
 	Endpoint_Read_Stream_LE(&WriteMemory_XPROG_Params, (sizeof(WriteMemory_XPROG_Params) -
-	                                                    sizeof(WriteMemory_XPROG_Params).ProgData));
+	                                                    sizeof(WriteMemory_XPROG_Params).ProgData), NO_STREAM_CALLBACK);
 	WriteMemory_XPROG_Params.Address = SwapEndian_32(WriteMemory_XPROG_Params.Address);
 	WriteMemory_XPROG_Params.Length  = SwapEndian_16(WriteMemory_XPROG_Params.Length);
-	Endpoint_Read_Stream_LE(&WriteMemory_XPROG_Params.ProgData, WriteMemory_XPROG_Params.Length);
+	Endpoint_Read_Stream_LE(&WriteMemory_XPROG_Params.ProgData, WriteMemory_XPROG_Params.Length, NO_STREAM_CALLBACK);
 
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
@@ -351,7 +351,7 @@ static void XPROGProtocol_ReadMemory(void)
 		uint16_t Length;
 	} ReadMemory_XPROG_Params;
 	
-	Endpoint_Read_Stream_LE(&ReadMemory_XPROG_Params, sizeof(ReadMemory_XPROG_Params));
+	Endpoint_Read_Stream_LE(&ReadMemory_XPROG_Params, sizeof(ReadMemory_XPROG_Params), NO_STREAM_CALLBACK);
 	ReadMemory_XPROG_Params.Address = SwapEndian_32(ReadMemory_XPROG_Params.Address);
 	ReadMemory_XPROG_Params.Length  = SwapEndian_16(ReadMemory_XPROG_Params.Length);
 
@@ -380,7 +380,7 @@ static void XPROGProtocol_ReadMemory(void)
 	Endpoint_Write_Byte(ReturnStatus);
 	
 	if (ReturnStatus == XPRG_ERR_OK)
-	  Endpoint_Write_Stream_LE(ReadBuffer, ReadMemory_XPROG_Params.Length);
+	  Endpoint_Write_Stream_LE(ReadBuffer, ReadMemory_XPROG_Params.Length, NO_STREAM_CALLBACK);
 	
 	Endpoint_ClearIN();
 }
@@ -397,7 +397,7 @@ static void XPROGProtocol_ReadCRC(void)
 		uint8_t CRCType;
 	} ReadCRC_XPROG_Params;
 	
-	Endpoint_Read_Stream_LE(&ReadCRC_XPROG_Params, sizeof(ReadCRC_XPROG_Params));
+	Endpoint_Read_Stream_LE(&ReadCRC_XPROG_Params, sizeof(ReadCRC_XPROG_Params), NO_STREAM_CALLBACK);
 	Endpoint_ClearOUT();
 	Endpoint_SetEndpointDirection(ENDPOINT_DIR_IN);
 	
diff --git a/Projects/AVRISP-MKII/makefile b/Projects/AVRISP-MKII/makefile
index a3f1368387b0aa84dcd9b1dba6311f8f5c41b50d..58d2a46d0901f0518ab9d19929636ab90d619a89 100644
--- a/Projects/AVRISP-MKII/makefile
+++ b/Projects/AVRISP-MKII/makefile
@@ -119,7 +119,6 @@ LUFA_PATH = ../../
 LUFA_OPTS  = -D USB_DEVICE_ONLY
 LUFA_OPTS += -D FIXED_CONTROL_ENDPOINT_SIZE=16
 LUFA_OPTS += -D FIXED_NUM_CONFIGURATIONS=1
-LUFA_OPTS += -D NO_STREAM_CALLBACKS
 LUFA_OPTS += -D USE_FLASH_DESCRIPTORS
 LUFA_OPTS += -D USE_STATIC_OPTIONS="(USB_DEVICE_OPT_FULLSPEED | USB_OPT_REG_ENABLED | USB_OPT_AUTO_PLL)"
 
diff --git a/Projects/XPLAINBridge/Descriptors.c b/Projects/XPLAINBridge/USARTDescriptors.c
similarity index 83%
rename from Projects/XPLAINBridge/Descriptors.c
rename to Projects/XPLAINBridge/USARTDescriptors.c
index 87746991e5afd26e903af78be426084c59fdc088..d8587f2b2f883683b8f0016087e89c64bfdbd7fa 100644
--- a/Projects/XPLAINBridge/Descriptors.c
+++ b/Projects/XPLAINBridge/USARTDescriptors.c
@@ -35,7 +35,7 @@
  *  the device's capabilities and functions.  
  */
 
-#include "Descriptors.h"
+#include "USARTDescriptors.h"
 
 /* On some devices, there is a factory set internal serial number which can be automatically sent to the host as
  * the device's serial number when the Device Descriptor's .SerialNumStrIndex entry is set to USE_INTERNAL_SERIAL.
@@ -54,7 +54,7 @@
  *  number of device configurations. The descriptor is read out by the USB host when the enumeration
  *  process begins.
  */
-USB_Descriptor_Device_t PROGMEM DeviceDescriptor =
+USB_Descriptor_Device_t PROGMEM USART_DeviceDescriptor =
 {
 	.Header                 = {.Size = sizeof(USB_Descriptor_Device_t), .Type = DTYPE_Device},
 		
@@ -81,13 +81,13 @@ USB_Descriptor_Device_t PROGMEM DeviceDescriptor =
  *  and endpoints. The descriptor is read out by the USB host during the enumeration process when selecting
  *  a configuration so that the host may correctly communicate with the USB device.
  */
-USB_Descriptor_Configuration_t PROGMEM ConfigurationDescriptor =
+USART_USB_Descriptor_Configuration_t PROGMEM USART_ConfigurationDescriptor =
 {
 	.Config = 
 		{
 			.Header                 = {.Size = sizeof(USB_Descriptor_Configuration_Header_t), .Type = DTYPE_Configuration},
 
-			.TotalConfigurationSize = sizeof(USB_Descriptor_Configuration_t),
+			.TotalConfigurationSize = sizeof(USART_USB_Descriptor_Configuration_t),
 			.TotalInterfaces        = 2,
 				
 			.ConfigurationNumber    = 1,
@@ -197,7 +197,7 @@ USB_Descriptor_Configuration_t PROGMEM ConfigurationDescriptor =
  *  the string descriptor with index 0 (the first index). It is actually an array of 16-bit integers, which indicate
  *  via the language ID table available at USB.org what languages the device supports for its string descriptors.
  */
-USB_Descriptor_String_t PROGMEM LanguageString =
+USB_Descriptor_String_t PROGMEM USART_LanguageString =
 {
 	.Header                 = {.Size = USB_STRING_LEN(1), .Type = DTYPE_String},
 		
@@ -208,7 +208,7 @@ USB_Descriptor_String_t PROGMEM LanguageString =
  *  form, and is read out upon request by the host when the appropriate string ID is requested, listed in the Device
  *  Descriptor.
  */
-USB_Descriptor_String_t PROGMEM ManufacturerString =
+USB_Descriptor_String_t PROGMEM USART_ManufacturerString =
 {
 	.Header                 = {.Size = USB_STRING_LEN(11), .Type = DTYPE_String},
 		
@@ -219,20 +219,14 @@ USB_Descriptor_String_t PROGMEM ManufacturerString =
  *  and is read out upon request by the host when the appropriate string ID is requested, listed in the Device
  *  Descriptor.
  */
-USB_Descriptor_String_t PROGMEM ProductString =
+USB_Descriptor_String_t PROGMEM USART_ProductString =
 {
 	.Header                 = {.Size = USB_STRING_LEN(18), .Type = DTYPE_String},
 		
 	.UnicodeString          = L"LUFA XPLAIN Bridge"
 };
 
-/** This function is called by the library when in device mode, and must be overridden (see library "USB Descriptors"
- *  documentation) by the application code so that the address and size of a requested descriptor can be given
- *  to the USB library. When the device receives a Get Descriptor request on the control endpoint, this function
- *  is called so that the descriptor details can be passed back and the appropriate descriptor sent back to the
- *  USB host.
- */
-uint16_t CALLBACK_USB_GetDescriptor(const uint16_t wValue, const uint8_t wIndex, void** const DescriptorAddress)
+uint16_t USART_GetDescriptor(const uint16_t wValue, const uint8_t wIndex, void** const DescriptorAddress)
 {
 	const uint8_t  DescriptorType   = (wValue >> 8);
 	const uint8_t  DescriptorNumber = (wValue & 0xFF);
@@ -243,27 +237,27 @@ uint16_t CALLBACK_USB_GetDescriptor(const uint16_t wValue, const uint8_t wIndex,
 	switch (DescriptorType)
 	{
 		case DTYPE_Device: 
-			Address = (void*)&DeviceDescriptor;
+			Address = (void*)&USART_DeviceDescriptor;
 			Size    = sizeof(USB_Descriptor_Device_t);
 			break;
 		case DTYPE_Configuration: 
-			Address = (void*)&ConfigurationDescriptor;
-			Size    = sizeof(USB_Descriptor_Configuration_t);
+			Address = (void*)&USART_ConfigurationDescriptor;
+			Size    = sizeof(USART_USB_Descriptor_Configuration_t);
 			break;
 		case DTYPE_String: 
 			switch (DescriptorNumber)
 			{
 				case 0x00: 
-					Address = (void*)&LanguageString;
-					Size    = pgm_read_byte(&LanguageString.Header.Size);
+					Address = (void*)&USART_LanguageString;
+					Size    = pgm_read_byte(&USART_LanguageString.Header.Size);
 					break;
 				case 0x01: 
-					Address = (void*)&ManufacturerString;
-					Size    = pgm_read_byte(&ManufacturerString.Header.Size);
+					Address = (void*)&USART_ManufacturerString;
+					Size    = pgm_read_byte(&USART_ManufacturerString.Header.Size);
 					break;
 				case 0x02: 
-					Address = (void*)&ProductString;
-					Size    = pgm_read_byte(&ProductString.Header.Size);
+					Address = (void*)&USART_ProductString;
+					Size    = pgm_read_byte(&USART_ProductString.Header.Size);
 					break;
 			}
 			
diff --git a/Projects/XPLAINBridge/Descriptors.h b/Projects/XPLAINBridge/USARTDescriptors.h
similarity index 87%
rename from Projects/XPLAINBridge/Descriptors.h
rename to Projects/XPLAINBridge/USARTDescriptors.h
index a5461dd74e0c488483fd5d4321fa4c02d6042249..7b5a39112aa978324af1bb7dd35a83cd9e9132d2 100644
--- a/Projects/XPLAINBridge/Descriptors.h
+++ b/Projects/XPLAINBridge/USARTDescriptors.h
@@ -30,11 +30,11 @@
 
 /** \file
  *
- *  Header file for Descriptors.c.
+ *  Header file for USARTDescriptors.c.
  */
  
-#ifndef _DESCRIPTORS_H_
-#define _DESCRIPTORS_H_
+#ifndef _USART_DESCRIPTORS_H_
+#define _USART_DESCRIPTORS_H_
 
 	/* Includes: */
 		#include <avr/pgmspace.h>
@@ -56,8 +56,8 @@
 		#define CDC_NOTIFICATION_EPSIZE        8
 
 		/** Size in bytes of the CDC data IN and OUT endpoints. */
-		#define CDC_TXRX_EPSIZE                16	
-
+		#define CDC_TXRX_EPSIZE                16
+		
 	/* Type Defines: */
 		/** Type define for the device configuration descriptor structure. This must be defined in the
 		 *  application code, as the configuration descriptor contains several sub-descriptors which
@@ -75,10 +75,9 @@
 			USB_Descriptor_Interface_t               DCI_Interface;
 			USB_Descriptor_Endpoint_t                DataOutEndpoint;
 			USB_Descriptor_Endpoint_t                DataInEndpoint;
-		} USB_Descriptor_Configuration_t;
+		} USART_USB_Descriptor_Configuration_t;
 
 	/* Function Prototypes: */
-		uint16_t CALLBACK_USB_GetDescriptor(const uint16_t wValue, const uint8_t wIndex, void** const DescriptorAddress)
-											ATTR_WARN_UNUSED_RESULT ATTR_NON_NULL_PTR_ARG(3);
+		uint16_t USART_GetDescriptor(const uint16_t wValue, const uint8_t wIndex, void** const DescriptorAddress);
 
 #endif
diff --git a/Projects/XPLAINBridge/XPLAINBridge.c b/Projects/XPLAINBridge/XPLAINBridge.c
index 37509a981e0c6a0d525bf0bac45a559d5379ea54..2de545f9510fe49df01bddf20e5d32cf4eebca82 100644
--- a/Projects/XPLAINBridge/XPLAINBridge.c
+++ b/Projects/XPLAINBridge/XPLAINBridge.c
@@ -36,11 +36,8 @@
 
 #include "XPLAINBridge.h"
 
-/** Circular buffer to hold data from the host before it is sent to the device via the serial port. */
-RingBuff_t USBtoUART_Buffer;
-
-/** Circular buffer to hold data from the serial port before it is sent to the host. */
-RingBuff_t UARTtoUSB_Buffer;
+/* Current firmware mode, making the device behave as either a programmer or a USART bridge */
+bool CurrentFirmwareMode = MODE_PDI_PROGRAMMER;
 
 /** LUFA CDC Class driver interface configuration and state information. This structure is
  *  passed to all CDC Class driver functions, so that multiple instances of the same class
@@ -65,6 +62,13 @@ USB_ClassInfo_CDC_Device_t VirtualSerial_CDC_Interface =
 				.NotificationEndpointDoubleBank = false,
 			},
 	};
+	
+/** Circular buffer to hold data from the host before it is sent to the device via the serial port. */
+RingBuff_t USBtoUART_Buffer;
+
+/** Circular buffer to hold data from the serial port before it is sent to the host. */
+RingBuff_t UARTtoUSB_Buffer;
+
 
 /** Main program entry point. This routine contains the overall program flow, including initial
  *  setup of all components and the main program loop.
@@ -78,32 +82,60 @@ int main(void)
 
 	for (;;)
 	{
-		/* Read bytes from the USB OUT endpoint into the UART transmit buffer */
-		for (uint8_t DataBytesRem = CDC_Device_BytesReceived(&VirtualSerial_CDC_Interface); DataBytesRem != 0; DataBytesRem--)
+		if (USB_DeviceState == DEVICE_STATE_Configured)
 		{
-			if (!(BUFF_STATICSIZE - USBtoUART_Buffer.Elements))
-			  break;
-			  
-			Buffer_StoreElement(&USBtoUART_Buffer, CDC_Device_ReceiveByte(&VirtualSerial_CDC_Interface));
+			if (CurrentFirmwareMode == MODE_USART_BRIDGE)
+			  USARTBridge_Task();
+			else
+			  AVRISP_Task();
 		}
 		
-		/* Read bytes from the UART receive buffer into the USB IN endpoint */
-		if (UARTtoUSB_Buffer.Elements)
-		  CDC_Device_SendByte(&VirtualSerial_CDC_Interface, Buffer_GetElement(&UARTtoUSB_Buffer));
-		
-		/* Load bytes from the UART transmit buffer into the UART */
-		if ((USBtoUART_Buffer.Elements) && SoftUART_IsReady())
-		  SoftUART_TxByte(Buffer_GetElement(&USBtoUART_Buffer));
-		
-		/* Load bytes from the UART into the UART receive buffer */
-		if(SoftUART_IsReceived())
-			Buffer_StoreElement(&UARTtoUSB_Buffer, SoftUART_RxByte());
-
-		CDC_Device_USBTask(&VirtualSerial_CDC_Interface);
 		USB_USBTask();
 	}
 }
 
+void AVRISP_Task(void)
+{
+	Endpoint_SelectEndpoint(AVRISP_DATA_EPNUM);
+	
+	/* Check to see if a V2 Protocol command has been received */
+	if (Endpoint_IsOUTReceived())
+	{
+		LEDs_SetAllLEDs(LEDMASK_BUSY);
+
+		/* Pass off processing of the V2 Protocol command to the V2 Protocol handler */
+		V2Protocol_ProcessCommand();
+
+		LEDs_SetAllLEDs(LEDMASK_USB_READY);
+	}
+}
+
+void USARTBridge_Task(void)
+{
+	/* Read bytes from the USB OUT endpoint into the UART transmit buffer */
+	for (uint8_t DataBytesRem = CDC_Device_BytesReceived(&VirtualSerial_CDC_Interface); DataBytesRem != 0; DataBytesRem--)
+	{
+		if (!(BUFF_STATICSIZE - USBtoUART_Buffer.Elements))
+		  break;
+		  
+		Buffer_StoreElement(&USBtoUART_Buffer, CDC_Device_ReceiveByte(&VirtualSerial_CDC_Interface));
+	}
+	
+	/* Read bytes from the UART receive buffer into the USB IN endpoint */
+	if (UARTtoUSB_Buffer.Elements)
+	  CDC_Device_SendByte(&VirtualSerial_CDC_Interface, Buffer_GetElement(&UARTtoUSB_Buffer));
+	
+	/* Load bytes from the UART transmit buffer into the UART */
+	if ((USBtoUART_Buffer.Elements) && SoftUART_IsReady())
+	  SoftUART_TxByte(Buffer_GetElement(&USBtoUART_Buffer));
+	
+	/* Load bytes from the UART into the UART receive buffer */
+	if(SoftUART_IsReceived())
+		Buffer_StoreElement(&UARTtoUSB_Buffer, SoftUART_RxByte());
+
+	CDC_Device_USBTask(&VirtualSerial_CDC_Interface);
+}
+
 /** Configures the board hardware and chip peripherals for the demo's functionality. */
 void SetupHardware(void)
 {
@@ -118,21 +150,59 @@ void SetupHardware(void)
 	SoftUART_Init();
 	LEDs_Init();
 	USB_Init();
+	V2Protocol_Init();
 	
-	PORTD |= (1 << 5); // PD5 is connected to the XMEGA /RESET, enable pullup
+	/* Disable JTAG debugging */
+	MCUCR |= (1 << JTD);
+	MCUCR |= (1 << JTD);
+
+	/* Enable pullup on the JTAG TDI pin so we can use it to select the mode */
+	PORTF |= (1 << 7);
+	_delay_ms(10);
+
+	/* Select the firmware mode based on the JTD pin's value */
+	CurrentFirmwareMode = (PINF & (1 << 7)) ? MODE_USART_BRIDGE : MODE_PDI_PROGRAMMER;
 }
 
 /** Event handler for the library USB Configuration Changed event. */
 void EVENT_USB_Device_ConfigurationChanged(void)
 {
-	LEDs_SetAllLEDs(LEDS_LED1);
+	bool EndpointConfigSuccess;
+
+	if (CurrentFirmwareMode == MODE_USART_BRIDGE)
+	{
+		EndpointConfigSuccess = CDC_Device_ConfigureEndpoints(&VirtualSerial_CDC_Interface);
+	}
+	else
+	{
+		EndpointConfigSuccess = Endpoint_ConfigureEndpoint(AVRISP_DATA_EPNUM, EP_TYPE_BULK,
+										                   ENDPOINT_DIR_OUT, AVRISP_DATA_EPSIZE,
+										                   ENDPOINT_BANK_SINGLE);
+	}
 
-	if (!(CDC_Device_ConfigureEndpoints(&VirtualSerial_CDC_Interface)))
-		LEDs_SetAllLEDs(LEDS_NO_LEDS);
+	if (EndpointConfigSuccess)
+	  LEDs_SetAllLEDs(LEDMASK_USB_READY);
+	else
+	  LEDs_SetAllLEDs(LEDMASK_USB_ERROR);
 }
 
 /** Event handler for the library USB Unhandled Control Request event. */
 void EVENT_USB_Device_UnhandledControlRequest(void)
 {
-	CDC_Device_ProcessControlRequest(&VirtualSerial_CDC_Interface);
+	if (CurrentFirmwareMode == MODE_USART_BRIDGE)
+	  CDC_Device_ProcessControlRequest(&VirtualSerial_CDC_Interface);
+}
+
+/** This function is called by the library when in device mode, and must be overridden (see library "USB Descriptors"
+ *  documentation) by the application code so that the address and size of a requested descriptor can be given
+ *  to the USB library. When the device receives a Get Descriptor request on the control endpoint, this function
+ *  is called so that the descriptor details can be passed back and the appropriate descriptor sent back to the
+ *  USB host.
+ */
+uint16_t CALLBACK_USB_GetDescriptor(const uint16_t wValue, const uint8_t wIndex, void** const DescriptorAddress)
+{
+	if (CurrentFirmwareMode == MODE_USART_BRIDGE)
+	  return USART_GetDescriptor(wValue, wIndex, DescriptorAddress);
+	else
+	  return AVRISP_GetDescriptor(wValue, wIndex, DescriptorAddress);
 }
diff --git a/Projects/XPLAINBridge/XPLAINBridge.h b/Projects/XPLAINBridge/XPLAINBridge.h
index 6b8d2a5f3aba9061657fae6eb26ffbf14a977e09..543a03e72c61783e48ad357a73e5577698ab9553 100644
--- a/Projects/XPLAINBridge/XPLAINBridge.h
+++ b/Projects/XPLAINBridge/XPLAINBridge.h
@@ -41,10 +41,12 @@
 		#include <avr/wdt.h>
 		#include <avr/power.h>
 
-		#include "Descriptors.h"
+		#include "AVRISPDescriptors.h"
+		#include "USARTDescriptors.h"
 
 		#include "Lib/RingBuff.h"
-		#include "Lib/SoftUART.h"
+		#include "Lib/SoftUART.h"		
+		#include <Lib/V2Protocol.h>
 
 		#include <LUFA/Version.h>
 		#include <LUFA/Drivers/Board/LEDs.h>
@@ -53,23 +55,36 @@
 
 	/* Macros: */
 		/** LED mask for the library LED driver, to indicate that the USB interface is not ready. */
-		#define LEDMASK_USB_NOTREADY      LEDS_LED1
+		#define LEDMASK_USB_NOTREADY     LEDS_LED1
 
 		/** LED mask for the library LED driver, to indicate that the USB interface is enumerating. */
-		#define LEDMASK_USB_ENUMERATING  (LEDS_LED2 | LEDS_LED3)
+		#define LEDMASK_USB_ENUMERATING  LEDS_LED1
 
 		/** LED mask for the library LED driver, to indicate that the USB interface is ready. */
-		#define LEDMASK_USB_READY        (LEDS_LED2 | LEDS_LED4)
+		#define LEDMASK_USB_READY        LEDS_NO_LEDS
 
 		/** LED mask for the library LED driver, to indicate that an error has occurred in the USB interface. */
-		#define LEDMASK_USB_ERROR        (LEDS_LED1 | LEDS_LED3)
+		#define LEDMASK_USB_ERROR        LEDS_LED1
+		
+		/** LED mask for the library LED driver, to indicate that the USB interface is busy. */
+		#define LEDMASK_BUSY             LEDS_LED1
+
+		#define MODE_USART_BRIDGE        false
+		#define MODE_PDI_PROGRAMMER      true		
+
+	/* External Variables: */
+		extern bool CurrentFirmwareMode;
 		
 	/* Function Prototypes: */
 		void SetupHardware(void);
+		void AVRISP_Task(void);
+		void USARTBridge_Task(void);
 
 		void EVENT_USB_Device_ConfigurationChanged(void);
 		void EVENT_USB_Device_UnhandledControlRequest(void);
 		
 		void EVENT_CDC_Device_LineEncodingChanged(USB_ClassInfo_CDC_Device_t* const CDCInterfaceInfo);
 
+		uint16_t CALLBACK_USB_GetDescriptor(const uint16_t wValue, const uint8_t wIndex, void** const DescriptorAddress);
+
 #endif
diff --git a/Projects/XPLAINBridge/makefile b/Projects/XPLAINBridge/makefile
index fc7244ff4a129c38c3dd297ba9496697b8eea0b9..831d53bbd660b57129966eef960d2088189dac87 100644
--- a/Projects/XPLAINBridge/makefile
+++ b/Projects/XPLAINBridge/makefile
@@ -114,6 +114,8 @@ OBJDIR = .
 # Path to the LUFA library
 LUFA_PATH = ../../
 
+# Path to the LUFA AVRISP-MKII project
+AVRISP_PATH = ../AVRISP-MKII/
 
 # LUFA library compile-time options
 LUFA_OPTS  = -D USB_DEVICE_ONLY
@@ -125,9 +127,18 @@ LUFA_OPTS += -D USE_STATIC_OPTIONS="(USB_DEVICE_OPT_FULLSPEED | USB_OPT_REG_ENAB
 
 # List C source files here. (C dependencies are automatically generated.)
 SRC = $(TARGET).c                                                 \
-	  Descriptors.c                                               \
+	  AVRISPDescriptors.c                                         \
+	  USARTDescriptors.c                                          \
 	  Lib/RingBuff.c                                              \
 	  Lib/SoftUART.c                                              \
+	  $(AVRISP_PATH)/Lib/V2Protocol.c                             \
+      $(AVRISP_PATH)/Lib/V2ProtocolParams.c                       \
+      $(AVRISP_PATH)/Lib/ISP/ISPProtocol.c                        \
+      $(AVRISP_PATH)/Lib/ISP/ISPTarget.c                          \
+	  $(AVRISP_PATH)/Lib/XPROG/XPROGProtocol.c                    \
+	  $(AVRISP_PATH)/Lib/XPROG/XPROGTarget.c                      \
+	  $(AVRISP_PATH)/Lib/XPROG/XMEGANVM.c                         \
+	  $(AVRISP_PATH)/Lib/XPROG/TINYNVM.c                          \
 	  $(LUFA_PATH)/LUFA/Drivers/USB/LowLevel/DevChapter9.c        \
 	  $(LUFA_PATH)/LUFA/Drivers/USB/LowLevel/Endpoint.c           \
 	  $(LUFA_PATH)/LUFA/Drivers/USB/LowLevel/Host.c               \
@@ -173,7 +184,7 @@ DEBUG = dwarf-2
 #     Each directory must be seperated by a space.
 #     Use forward slashes for directory separators.
 #     For a directory that has spaces, enclose it in quotes.
-EXTRAINCDIRS = $(LUFA_PATH)/
+EXTRAINCDIRS = $(LUFA_PATH)/ $(AVRISP_PATH)/ 
 
 
 # Compiler flag to set the C Standard level.
@@ -186,12 +197,11 @@ CSTANDARD = -std=gnu99
 
 # Place -D or -U options here for C sources
 CDEFS  = -DF_CPU=$(F_CPU)UL -DF_CLOCK=$(F_CLOCK)UL -DBOARD=BOARD_$(BOARD) $(LUFA_OPTS)
-CDEFS += -DAVR_RESET_LINE_PORT="PORTD"
-CDEFS += -DAVR_RESET_LINE_DDR="DDRD"
-CDEFS += -DAVR_RESET_LINE_MASK="(1 << 4)"
-CDEFS += -DAVR_RESET_PULSE_MS=10
-CDEFS += -DTX_RX_LED_PULSE_MS=30
-CDEFS += -DPING_PONG_LED_PULSE_MS=100
+CDEFS += -DAUX_LINE_PORT=PORTB
+CDEFS += -DAUX_LINE_PIN=PINB
+CDEFS += -DAUX_LINE_DDR=DDRB
+CDEFS += -DAUX_LINE_MASK="(1 << 4)"
+CDEFS += -DVTARGET_ADC_CHANNEL=2
 
 # Place -D or -U options here for ASM sources
 ADEFS = -DF_CPU=$(F_CPU)